PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PFD9B
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 221aa    MW: 24447.9 Da    PI: 8.4766
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PFD9BgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.5e-06132173955
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   ++R + i ++++ L+el+P+       K++ + +LekA+ Y+k Lq
  Araip.PFD9B 132 AKNRKEGISERLNILQELVPNG-----SKVDLVIMLEKAISYVKFLQ 173
                  689999***************5.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.58E-12120181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-10120181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.09E-8121177No hitNo description
PROSITE profilePS5088813.637123172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-7129178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
AGHQGEGERG VAVASNKDHH HGCDQPHCYL IDLAVVVLLY SFLLFHLILP KEEGAKENQL  60
HGESSSYGWL YSQQTIPAHS IQDPAVQEPI SKTHISMQAE KMKASKKQCT NESKMPKSNK  120
SEASKDPQSV AAKNRKEGIS ERLNILQELV PNGSKVDLVI MLEKAISYVK FLQLQVKVLA  180
ANEFLPVQGG KVPDISQAKE AIHAILSSQR LEKQVQQPQS R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016173040.11e-114PREDICTED: transcription factor bHLH83-like
SwissprotQ9C7071e-45BH083_ARATH; Transcription factor bHLH83
TrEMBLA0A0B2QM313e-60A0A0B2QM31_GLYSO; Putative transcription factor bHLH086-like protein
TrEMBLI1M8673e-60I1M867_SOYBN; BHLH transcription factor
STRINGGLYMA14G07590.18e-60(Glycine max)
STRINGGLYMA18G04420.13e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49373253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.11e-46ROOT HAIR DEFECTIVE6